CIKM, Joint Workshop of the 12th Data and Text Mining in Biomedical Informatics (DTMBIO 2018) and the 1st Knowledge Management for HealthCare (KMH)

– Presentations: Full paper: 20 minutes / Lightning presentation (as a poster): 5 minutes

Download DTMBIOKMH2018 schedule


08:00-09:00 Registration
09:00-09:10 Welcome message:

Prof. Sangwoo Kim (Yonsei Univ.)

09:00-09:40 Keynote speech:

“New Trend in Therapeutics Research: Computational Biology for Identifying Novel Therapeutic Targets, Biomarkers and Drug Repositioning Opportunities”
Prof. Namshik Han (Univ. of Cambridge)

chair: Prof. Sangwoo Kim (Yonsei Univ.)

Session 1 – Biological Findings from Omics and text data

chair: Dr. Hyojung Paik (KISTI)

09:40-10:00 Wonjin Yoon et al

“CollaboNet: Collaboration of Deep Neural Networks for Biomedical Named Entity Recognition”

10:00-10:20 Zolzaya Dashdorj et al.
“Relation Classification by Convolutional Neural Networks with Highlighted Features”
10:20-10:40 Jihoon Jo et al.

“Conventionally Used Reference Genes are not Outstanding for Normalization of Gene Expression in Human Cancer Research”

  Coffee break
Session 2 – Biomedical Application of Knowledge Analysis

chair: Prof. Rosalba Giugno (Univ. of Verona)

11:10-11:30 João Diogo Ferreira et al.
“Multi-Domain Semantic Similarity in Biomedical Research”
11:30-11:50 A-Sol Choi et al.
“Drug Repositioning of Herbal Compounds via a Machine-Learning Approach”
11:50-12:10 Mijin Kwon et al.

“CODA-ML: Context-Specific Biological Knowledge Representation for Systemic Physiology Analysis”

  Lunch (on your own)
  Session 3 – Biomedical Modeling and Prediction

Dr. Mauro Dragoni (Fondazione Bruno Kessler)

13:30-13:50 Hyang-Mi Lee et al.

“Computational Determination of hERG-Related Cardiac Toxicity of Drug Candidates”

13:50-14:10 Judita Preiss

“Is Automatic Detection of Hidden Knowledge an Anomaly?”

14:10-14:30 Puspa Pratiwi et al.

“User Profile Ontology to Support Personalisation for E-Coaching Systems”

14:30-14:50 Fabio Angeletti et al.

“Random Projection to Preserve Patient Privacy”

  Coffee break
15:30-16:00 Session 4 – Lightning presentation (Poster)

chair: Dokyun Na (Chung-Ang Univ.)


– Maristella Agosti et al.“A Relation Extraction Approach for Clinical Decision Support”

Anna Bernasconi “Using Metadata for Locating Genomic Datasets on a Global Scale”

Tegg Taekyong Sung et al.“GDMiner: Gene-Disease Relation Miner System”

Xavier Cortés et al. “Nerve Contours Tracking in Ultrasound Images for Robotic Surgery”

Go Eun Heo“Literature Based Discovery with Uncertainty in the Biomedical


16:00 Closing remarks:

Dr. Mauro Dragoni (Fondazione Bruno Kessler)